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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and the University of California, Berkeley were also involved in the work. Other authors on the paper are Fotis …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Researchers from the following institutions were also involved in this work: University of Texas at Austin, …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User …
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David Goodstein
With a background in experimental and computational surface physics, Dr. … equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to … Genome Project, he began developing larger comparative genomic systems as the JGI’s eukaryote research efforts …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed at …
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Cytochromes P450 involved in bacterial RiPP biosyntheses.
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SbCOMT (Bmr12) is involved in the biosynthesis of tricin-lignin in sorghum
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging … has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at …
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