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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … of the world: Crystal Geyser, Utah, USA, and Horonobe Underground Research Laboratory, Hokkaido, Japan. From samples of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence …
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Rice SNP-seek database update: new SNPs, indels, and queries
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A New Method to Correct for Habitat Filtering in Microbial Correlation Networks
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Genomes OnLine database (GOLD) v.7: updates and new features
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New keys to unlock the treasure trove of microbial natural products
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Functional genomics gives new insights into the ectomycorrhizal degradation of chitin
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a …
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Biotech Partners
… They encourage students to pursue personal, academic, and professional development experiences through in-classroom … Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … the PacBio data only, and then do a subsequent polishing round with the Illumina data. It’s not strictly necessary, …
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Len Pennacchio
… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the …
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