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Microbial Program
… those associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and … lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal lineages that are … novel genes, protein families, and pathways, enhancing our understanding of evolutionary diversification and microbial …
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An Automated Tool for Assessing Virus Data Quality
… of these viruses and associate them with their microbial hosts. However, assembling viral genomes from metagenomes is … researchers to accurately perform functional assessment, host prediction, and phylogenetic analysis. The development … of a virus, and for viruses that have integrated into the host genome, these sequences may be tainted by the presence …
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Training the Next Generation of Talent
… student in the Quantitative Systems Biology (QSB) Group under the School of Natural Sciences (SNS). During his eight … faculty positions with the SNS, and Wang’s group was hosting another QSB graduate student, Travis Lawrence. … research problems. In Visel’s group, Olmstead worked with postdoctoral fellow Ben Cole on a project involving bacteria …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… a wide range of benefits, but it also requires a deep understanding of biological systems. The JGI strategic plan … expertise to grow in areas such as developing pathogen-agnostic detection and prediction strategies for types of … with other user facilities, and with JGI users, we aim to foster awareness and collaboration in support of our goals,” …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… assistance of microscope. “It’s 5,000 times bigger than most bacteria. To put it into context, it would be like a … filamentous bacterium, along with its life cycle. For most bacteria, their DNA floats freely within the cytoplasm … that they were a ‘macro’ microbe was fascinating!” “She understood that it was a bacterium belonging to the genus …
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Building Wet and Dry Lab Skills
… training grant.  Building off the previous year’s project, undergraduate interns Tamyra Long and Zyiah Mikes worked … genes affect microbiome composition and plant growth. Under the supervision of their mentors, they were … I feel like I'm up here. I can explain what we're doing. I understand what we're doing, and it was just a great …
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Fungal Friends or Foes in Plant Roots
… between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of … the plant’s health and diversity, which can in turn boost yields for both food and for candidate bioenergy … . They looked for genes known to be involved in fungal-host interactions and identified 84 gene families that were …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Research program because it also allows scientists to understand the assembly, function, and the behavior of … tetranucleotide frequencies, and an area’s environment hosts particular organisms and metabolisms. This implies that … update the Metagenome Stability Diagram. The tool is hosted on the National Energy Research Scientific Computing …
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Making a Lichen Together
… analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The Science The … the genomes and transcriptomes of both partners to better understand lichen. The Impact Lichens are a model for … Institute is supported by the U.S. DOE Office of Science under Contract No. DE-AC02-05CH11231. The work of MP, DL and …
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Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)
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The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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