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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms … sequencing. Shotgun metagenomic sequencing takes much less time than its single-cell counterpart. In this approach, DNA … a single cell and isolating it for analysis. Once it’s alone, the cell breaks apart and its DNA is copied millions of …
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Data Policy
… sharing. We also recognize the need to have a limited and time-sensitive protection of certain types of data to … sequencing or metabolomics projects: data are subject to a  one-year embargo .  For each data or analysis product (raw … 30, 2021 are subject to a 2-year embargo to maintain the timeline for unrestricted data availability agreed to at …
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Emiley Eloe-Fadrosh
… Program on their research are encouraged to schedule time with Emiley Eloe-Fadrosh . Click to schedule  … BS, Biochemistry and Cell Biology, University of California, San Diego ( magna … uncovers gaps in amplicon-based detection of microbial diversity. Nature Microbiol. 1: 15032. Eloe-Fadrosh EA, et …
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Extracting the Secrets of Secondary Metabolites
… As a demonstration, the researchers used CRAGE-CRISPR for discovering active secondary metabolites and helping them … hit the scene in 2019. Now, that power is poised to grow exponentially by combining it with CRISPR.  By employing CRAGE, … That work by JGI researchers was published April 2022 in Cell Chemical Biology . When it comes to insect killer P. …
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VEGA Symposium
… on how to best capture and characterize uncultivated viral diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity toward innovative biotechnological and industrial … related to functional characterization of novel viral diversity, molecular mechanisms of virus-host interactions …
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Mapping the Earth’s Hidden Fungal Kingdom
… into an estimated 2–6 million species — dwarfing the diversity of plants. To put this evolutionary timescale in perspective, the genus Aspergillus has been … forefront of tackling this enormous challenge, assembling one of the world's most comprehensive collections of fungal …
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Microbial Diversity for Biotechnology
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Game On: High School Students Drive Everglades Metagenomics Study
… class of 18 juniors.  He got turned down consistently, with one of his favorite answers being, “It would take a team of … Director’s Science Program. The class did not know at the time that the project had already received enthusiastic … They chose this location because much is unknown about the diversity of organisms (taxonomy) and particularly those in …
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What Happens Underground Influences Global Nutrient Cycles
… a joint research call. Submitted proposals addressed one of the following focus topic areas: Biofuels and … Berkeley studies the alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues … algae and land plants.  Within the biogeochemistry group, one of the four proposals selected is led by Eoin Brodie of …
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Ian Blaby
… editing by coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: 11. 2020 Blaby & Cheng, Building a custom … transcriptomes. The Plant Journal . 84: 5, 974-988. 2015 Zones et. al., High-resolution profiling of a synchronized … from Chlamydomonas reinhardtii reveals continuous cell and metabolic differentiation. The Plant Cell . 27: 10, …
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Picking Up Threads of Cotton Genomics
… crops. Additionally, cotton is almost entirely made up of cellulose and it is a fiber model to understand the … disciplines that relate directly and indirectly to genetic diversity, evolution, wild germplasm utilization and … from this high impact science for years to come,” said Don Jones, who handles variety improvement for  Cotton …
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Genome diversity in Brachypodium distachyon: deep sequencing of highly diverse inbred lines
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