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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis

Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data

The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data

Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato

Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger

Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data

MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses

The IMG/M data management and analysis system v.7: content updates and new features.

Extracting the Secrets of Secondary Metabolites

… has historically been limited due to the lack of robust tools available for carrying CRISPR into microorganisms. … of interest. Using CRAGE to domesticate target microbes, users of the U.S. Department of Energy (DOE) Joint Genome … monitor loss- and gain-of-function. The study’s analytical data shows peaks and valleys in secondary metabolites as …

Natural Prodcast Episode 19: Bill Fenical

… that I could combine a training in chemistry with a hobby of putting your head underwater. But thankfully that … for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with … this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.