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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … benefits. DAN: Now, you and I are working together on a project at the JGI to try to find new enediyne clusters and … – it’s no longer a silo. It really requires interaction from many different disciplines. And so this is where …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … Sea Research (NIOZ) Nicole Poulton , Bigelow Laboratory of Ocean Sciences Roland Hatzenpichler , Montana State … Program Tanja Woyke, Microbial Program Robert Bowers,  User Project Coordination Rekha Seshadri,  Functional Annotation …
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User Support Analysis Group
… for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have … information has allowed the research team to associate climate adaptations with switchgrass biology. Switchgrass … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have … ch allenges. Methane emissions are a massive factor driving climate change. According to the Environmental Protection … Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication Manager Sarah …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have … engagement activities under the umbrella of the SOD Blitz Project. In hopes of controlling the spread of the disease, … represent the first-ever large-scale “citizen science” project to generate real-time data for modeling and …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture … looked for genes known to be involved in fungal-host interactions and identified 84 gene families that were common in …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As … they can affect how microbes cycle nutrients and adapt to climate change. …
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals … When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help them take …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … and published in the journal Science . At the time, the project was co-led by Daniel Rokhsar, head of the JGI’s … new Chlamydomonas genome-related Community Science Program projects of all kinds,” noted Igor Grigoriev, head of the …
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A Shrubbier Version of Rubber
… one tree species: Hevea brasiliensis . It’s great at producing latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a desert shrub that’s native to North America: …
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