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Cataloging the Microbes that Manage the Health of River Systems
… can successfully partner with DOE user facilities and resources on such large-scale multi-omic data efforts, but … also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed at … Science Program and the University of Colorado Anschutz’s Genomics Shared Resource. The work (proposal …
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FICUS-NERSC/KBASE
… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and …
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Expanding Virophage Diversity
By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the … & Applications (VEGA) Symposium. The work also used resources of the National Energy Research Scientific …
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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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Micro-Scale Applications Group
… the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … various microscopy techniques … Stable isotope probing metagenomics: … Single cell: … For further details, please reach …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Yasuo Yoshikuni
… to improve crop yield, and developing a platform for building composite materials. Before joining the JGI, Dr. …
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Len Pennacchio
Lawrence Berkeley National Laboratory … The Deputy of Genomic Technologies serves as the JGI’s primary point of … include interacting with users seeking to exploit new genomic technologies and providing a vision for future … directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast landscape of …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… alumni, and other staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as representatives … UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research scientist and program mentor, …
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Microbial Genomics & Metagenomics (MGM) Workshop
… (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on … users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and …
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IMA genome-F18
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Gut Fungi: Unexpected Source of Novel Chemicals
… the fungi expressed biosynthetic gene clusters, which are “building blocks” of natural products. The team then … the JGI-EMSL Collaborative Science Initiative and used resources at the DOE Joint Genome Institute and the …
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