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… Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint …

… an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, … and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan Kuo at … to see their favorite alga’s predicted genes and their organization, and analyze genes in the nucleus and …

… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … analyzed.” Emiley Eloe-Fadrosh, head of the  JGI Metagenome Program and senior author on the study elaborated on … she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this episode …

… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to … waters, including the tropics, tend to be dominated by prokaryotes (microorganisms without a defined nucleus). … other words, some like it hot; some do not. “We can think about the ocean, naively, as a sort of homogeneous medium. …

… they need to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a fellow archaeal … cycling across the planet. Summary To understand more about how archaeal hosts and hitchhikers coexist, … they found a huge variety of CRISPR-Cas systems. Generally, prokaryotes use CRISPR-Cas systems to recognize and remove …

… interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  … v13. Below are some answers to Frequently Asked Questions about the transition from Phytozome v12 to v13. Why is it … The ability to user query sequences to gene families What about PhytoMine? PhytoMine, the Phytozome implementation of …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this … A more recent effort in the Woyke lab is therefore focused on the application of  function-driven single-cell …