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Unraveling the regulation of sugar beet pulp utilization in the industrially relevant fungus Aspergillus niger
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) … your proposal idea with JGI staff to clarify key points about JGI’s capabilities, technical feasibility, and … look at the PI’s track record to make sure that they have already worked with this type of data set. Having a co-PI …
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UC Merced Interns Reflect on Their JGI Summer Projects
… wide — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic information. Learn more about their work here in a series of videos produced by JGI … Click the image to watch the video … Intern: Brendan Blasius (undergraduate) Mentor: Guohong "Albert" Wu Click the …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought … have a number of initiatives across several different campuses with this being our largest and most successful one. … values by being able to pass along my knowledge to them as best as possible in a safe environment” This not only helped …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the potential of this collaboration stating, “We already identified a lot of synergies. To bring together …
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Extracting the Secrets of Secondary Metabolites
… combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those … paired CRISPR and CRAGE technologies. While CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is … and other industries — yet there’s still so much about them we don’t know.  Unlocking the power of secondary …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… the world’s rivers and their microbial communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with me to talk about his project, and riffed a bit on what it means in a … where we’re moving from when my father was born, of about 2 billion people on the planet, to you know, within my …
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Reductive amination cascades in cell‐free and resting whole cell formats for valorization of lignin deconstruction products
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JGI Launches Latest Strategic Plan
… sequence to the public data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the … among others. New areas of emphasis, for those who are already familiar with the research portfolio that the JGI … prospective partners to generate awareness of and clarity about the JGI’s strategic directions,” said Mouncey. “In …
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A Collaboration to Improve Plant Genome Annotations Across Species
… specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … author Avinash Sreedasyam, a HudsonAlpha senior scientist, about the project. The story is reposted here in modified … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …
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JGI@25: Using Team Science to Build Communities Around Data
The 1KFG project represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: … Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early diverging fungi, and Francis … National Institute for Agricultural Research (INRAE) focused on in-depth exploration of ecology-related groups of …
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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs … 9 (1), 1-9 Roux et al. (2018) Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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