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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been important in … (thermophilic) microbes are of interest for their potential use in number of biotechnological applications. Molecular … archaeal lineages, the team relied on a combination of phylogenomic analyses, transcriptomics for microbial genomic …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? How many samples are … information for funding by JGI? A: The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, …
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JGI Announces 2026 New Investigator Portfolio
… Sherbo, Jennifer E. Smith, Chin Chin Too, Brooke Weigel, Susanne Wilken, Jing Yuan, and Brittany N. Zepernick.    Each … these researchers will harness capabilities including metagenomics, metatranscriptomics and genome assembly to … the October 2026 review. You can also find more information about the JGI’s  various proposal calls here. …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive … trees are incorrect or need to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish … automatically assembled and run through your annotation pipeline then added to PhycoCosm (if relevant)? A:  For every …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but … shotgun sequencing are tricky because it’s difficult to link the connections to them from the genetic elements that …
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Decoding Yellowstone’s Microbial Mats
… Along the way, they’ve encountered surprises, adopted new technologies, and made a few discoveries about the microbial mat denizens.  …
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Comparison between Ribosomal Assembly and Machine Learning Tools for Microbial Identification of Organisms with Different Characteristics
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Architecture, catalysis and regulation of methylthio-alkane reductase for bacterial sulfur acquisition from volatile organic compounds
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics … Building was painted by Berkeley-based artist Nigel Sussman and dedicated at our 2022 Annual Meeting.  …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public databases and … that carry them were strikingly different in both size and organization: Mitochondrial genome size and structure varied … search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, … with new international collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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JGI Announces 2023 Community Science Program Awardees
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … success. “ The CSP Annual Call is focused on large-scale genomic science projects relevant to the DOE’s Office of … nutrient cycling, and biogeochemistry. You can learn more about this year’s recipients on our Twitter. Samples were …
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