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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… tap into the diverse talent that UC Merced has is tremendous for us, and we are very grateful for this opportunity.” … to seeing this internship program continue and I’m excited about what it will bring to the future of JGI, UC Merced and … updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant Professor of Mathematics at …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … Research Division.. As a postdoc, her research focused on stable and accurate computational methods for … 2018 NERSC, CRD Petascale Postdoctoral Fellow … Education … About the JGI Chief Informatics Officer … Selected …
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Transposable Elements versus the Fungal Genome: Impact on Whole-Genome Architecture and Transcriptional Profiles
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Size-fractionated metagenomic depth profiles from two sulfidic stations in the Chesapeake Bay.
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Drought shifts sorghum root metabolite and microbiome profiles and enriches for pipecolic acid
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An Integrated Dataset to Understand Ecosystem Interaction
… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metagenomes, 98 plant transcriptomes and 314 metabolomic profiles — combined offers the global research community …
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Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle
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Site-Selective C–H Halogenation Using Flavin-Dependent Halogenases Identified via Family-Wide Activity Profiling
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Multi-omics profiling of the cold tolerant Monoraphidium minutum 26B-AM in response to abiotic stress
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Scaling Up Existing Skill Sets
… experience working intermediately between academia and industry, which is something I didn’t even know existed before. … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has … JGI intern for a second time since participating in summer 2017 ( read more here on her previous experience) has …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … the development of novel computational tools to identify virus sequences, the design of new experimental approaches to … 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative … the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the whole soil profile. The goals of their FICUS proposal include assessing …
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