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Cataloging the Microbes that Manage the Health of River Systems
… might be added to the water along the way, impacting its quality and in turn affecting environmental and human … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types in … affect their growth rates, decomposition, and carbon sequestration. Researchers wanted to better understand how … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team …
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Open Frameworks Training the Next Generation of Scientists
… provides training and scientific contributions—including sequencing services and analysis—to participants. Over the … faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE … web portal,  MycoCosm . These data improve the quantity and quality of fungal gene annotations available to the global …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: … the researchers will receive a FedEx package with the sequenced, quality controlled population representing the full library. … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality genome and now crop researchers can work toward … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of …
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … for them. Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE …
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New Research Sheds Light on Diversity in the Deep Sea
… Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome analysis, … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) … Science Program award 339, lead Peter Girguis) for sequencing several of the samples. …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … GenomeOcean encompasses approximately 645.4 Gbp of high-quality contigs from diverse sources, derived from 219 Tb of …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Logos and Templates
… The JGI Style Guide offers tips on JGI logo usage - please follow these guidelines. Logos JGI logo – stacked JGI logo – horizontal JGI logo – indicia …
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