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Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.
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Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … what biochemical processes? Now, an international team of researchers has identified the major metabolic roles of … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Neha Varghese
… bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis pipelines and tools as well as …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   Usually, plants have the upper hand … into biochemical production.    Over time, as these projects have delivered results, they have also snowballed …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … database to include a dedicated section for viruses, so researchers around the world would have better, easier …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 … the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …
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The Mobilome in the Mire
…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move … bringing this mobilome into light, and opening up new options for engineering these microbes in the future. Join Sarah …
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Promoting the Power of Viral Metagenomics
… the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos Kyrpides , … early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect nearly … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to … can cause workplace injuries and illnesses.  PPE or Personal Protective Equipment is worn to minimize exposure to … illnesses. These injuries and illnesses may result from contact with chemical, biological, physical, mechanical, or …
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