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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Year in Review: JGI’s 2018 Progress Report Available Now
… is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , … Copies are available online – click here to go download one from the archive of JGI Progress Reports. Print copies will …
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that …
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Green Algae Reveal One mRNA Encodes Many Proteins
… research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National … Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … enabled by the “Facilities Integrating Collaborations for User Science” (FICUS) collaborative science initiative …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Filling in the Plant Tree of Life
… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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The Big Deal About Short Plants
… plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. … Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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MycoCosm Tutorial
… multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented … Igor Grigoriev, Steven Mondo, Steven Ahrendt and Sajeet Haridas. …
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JGI Workshops at PAG
… breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The … at the JGI and KBase toward integrative biology and hear from researchers who are applying genomic sequence information to BER funded activities of plant systems. We will …
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“A STEM career is in reach and accessible”
Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with Biotech … to fulfilling science careers, JGI hosted five students from Antioch High School this summer. …
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