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Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore …

In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March … order.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … at Berkeley Lab. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and …

Marcel is in charge of several production pipelines (gene calling, functional … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data …

… computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …

… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates …

Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …

Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …