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A More Intuitive Phytozome Interface
… only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. … which now hosts upwards of 250 plant genomes and has been under active development for over 5 years, provides users …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a scientific journal is … Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship program, this type of achievement is … of mathematics and bioinformatics. “I love data, and when you love something, you can’t help but share it with …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils … – are at the heart of sustaining food and bioenergy security for a steadily growing worldwide population. Anuvia … , a small Florida business producing bio-based plant nutrition products that target soil enrichment, is partnering …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … black-eyed peas, soybeans and chickpeas. While no longer under the umbrella of the JGI, McClean and Schmutz have … classes of common beans. “Beans are beans,” McClean said. “…When you’re trying to make discoveries, you’re going to end …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) … staple crop there is millet, grown without fertilizer and under erratic rainfall conditions. To help mitigate drought, … and these intercropping efforts appear to be redistributing water availability. By sequencing the millet rhizosphere and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The … onto a larger host — often, a fellow archaeal microbe. Understanding how these hosts and hitchhikers coexist is key … the foundation of this deep Earth ecosystem. For example, when certain viruses attack, their archaeal hosts release …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… assemblies, revealing the roles of microbial communities in carbon cycling, in interactions with plants, and as drivers of methane production, nutrient cycling, greenhouse gas emissions, and water recycling.” Tringe is the interim director of Berkeley …
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Crops as Tough as World Cup Turf
… corn, sorghum and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. And Karen Serrano …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the … the fields of genomics, structural biology, bioimaging, and water research. The meeting involved key representatives … Berkeley Lab.  Building on the momentum of a Memorandum of Understanding (MoU) signed between UDE and Berkeley Lab in …
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Learning to Look
… learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need … are in every major microbial habitat—including soil, water, and humans—around the world. By the numbers, the new … the inoviruses she studied “piggyback” off the anti-CRISPRs made by the co-infecting phages in the same host cell, …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New … match options in their proposal as long as they’re staying under the sequence cap? A(nswer): Proposals that are looking …
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