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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Fungal Friends or Foes in Plant Roots
… determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… and he noted the data had driven his lab’s focus on guide RNA library generation and development and its applications. … or through the  “Facilities Integrating Collaborations for User Science” (FICUS) initiative .  Q: What is the … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
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Green Algae Reveal One mRNA Encodes Many Proteins
… be monocistronic – that is, a single gene makes messenger RNA, which encodes a single protein. Gene expression in … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab and the Environmental … Sciences Laboratory (EMSL), a DOE Office of Science user facility. The work was partly enabled by the …
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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Digging into Microbial Ecosystems Deep Underground
… these systems.” -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his … at Colorado State University have many questions about the microbial communities deep underground, and before the … published paper with first author Amundson in the journal Microbiome . The work builds off a proposal approved …
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JGI@25: Studying Sorghum’s Survival Skills
… strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use … genome and releases it to the community. 2014: GENCODE project begins. To support growing sorghum and other C4 … to compare different varieties of sorghum. Initially, the project looks at how each variety stores sugars and …
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Frederik Schulz
… biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz …
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