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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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JGI Portals
Our data platforms are a key resource for the broader scientific community and require constant developments to … … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental … paper in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists …
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include … Haas School of Business Served as a reviewer for DOE’s Science & Operations Peer Review of the Center for …
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A Plant Root Atlas for Tracking Developmental Trajectories
… of the study’s co-authors is  Benjamin Cole , a research scientist at the U.S. Department of Energy (DOE) Joint … research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially … in wild type and cell identity mutants . Dev Cell. 2022 Feb 28. S1534-5807(22)00033-8.doi: …
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Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. … by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to M.O.). …
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Enlarging Windows into Understanding Gene Functions
… encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint … bind quickly and efficiently in the genome by adding tagged transcription factors to a genomic DNA library. “It’s … Community Science Program proposal call are due in Spring 2022. Byline: Massie S. Ballon       … The U.S. Department …
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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