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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database … prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … This work was supported by the United States Department of …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial … The U.S. Department of Energy Joint Genome Institute, a DOE … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever … This work was supported by the U.S. Department of Energy, …
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Fungal & Algal Program User Advisory Committee
… The Fungal & Algal Program Advisory Committee is chartered by the Science Program Heads and report back to them. The Committee … is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a … a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … clearer picture of how burned ecosystems return to health, researchers have taken a look at microbial genomes across a …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … platform — has been developed to help inform scientists and researchers more about the patterns and functions of … The work conducted by the US Department of Energy Joint … Energy operated under Contract No. DE-AC02-05CH11231. This research used resources of the National Energy Research …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer … IAC is chartered to render advice, guidance, and counsel on the effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize … The sequencing project was funded by the U.S. Department of … This work was supported by funds to S.Hac from a European Research Council starting grant (MICRORULES 758003), the …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … is in this soil? Jonathan had been reaching out to many researchers with the hope of getting support for a research … The U.S. Department of Energy Joint Genome Institute, a DOE …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main … Tanja Woyke is the Microbial Science Program Head as well as …
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JGI Advisory Committee
… The JGI Advisory Committee (JAC) is convened by the JGI … such as the User Executive Committee, the DNA Synthesis Science User Advisory Committee, the Fungal and Algal …
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