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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … a specific chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive isotope Carbon-13, …
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Fungal Friends or Foes in Plant Roots
… health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. … lobby have many reasons for being there, but they’re not always immediately apparent. Similarly, the microbes found in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … that I’d never done before from my mentors. Also, there’s always a better way to do something.” Mentors Daniela Cassol, …
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Gene Expression: From On-Off Switch to Dial
… library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, which leverages an … approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights … encoded in the viral genomes,” he said. “It seems to be way more common than had been previously thought.” Woyke …
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Uncovering Novel Genomes from Earth’s Microbiomes
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications.   … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … microbial diversity and function.” He is already finding ways to utilize the catalog in his own research on how …
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Doubling Down on Known Protein Families
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … DNA editing enzymes.” Leveraging Protein Families in a New Way The discovery of new protein families had started to …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a … Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … applied it to such a large data set, but also went all the way through to convert her biological observations into a …
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The Expanding Universe of Methane Metabolisms in Archaea
… of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly … form it emerged and how it gave rise to the different pathways we see today is not only important to understand early …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … traits. In a text file, the rows of letters A, T, C and G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the … to contribute to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were …
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