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Natural Prodcast Episode 13: Francisco Barona Goméz
… us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Hyperdiverse, bioactive, and interaction-specific metabolites produced only in co-culture suggest diverse competitors may fuel secondary metabolism of xylarialean fungi.
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Supercharging SIP in the Fungal Hyphosphere
… probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated … results. Applying this method to the study of a particular fungi, researchers identified novel interactions between … at a larger scale through downstream DNA purification and sequencing steps. Ultimately, researchers found their …
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A Grass Model to Help Improve Giant Miscanthus
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First Monoploid Reference Sequence of Sugarcane
… genomic breeding in these crops. For diploid species, sequencing programs generally focus on a genotype with two … hampered by the crop’s highly polyploid genome, which makes sequencing and assembly of the genome extremely challenging. … Centre for International Development (CIRAD), who worked on sequencing and assembling fragments of sugarcane chromosomes …
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Project Management Office
… approved proposal – including the submission of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all …
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Annotation survey and life-cycle transcriptomics of transcription factors in rust fungi (Pucciniales) identify a possible role for cold shock proteins in dormancy exit
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JGI@25: Using Team Science to Build Communities Around Data
… 1000 fungal genomes to create two reference genomes for all fungi families — essentially, the foundation for an … Riverside would focus on broad sampling of early diverging fungi, and Francis Martin of the French National Institute … “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are …
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Open Frameworks Training the Next Generation of Scientists
… provides training and scientific contributions—including sequencing services and analysis—to participants. Over the … students developing skills in fungal biology and genomics. Fungi can be better understood through reference genomes, … fungi in the environment, students can prepare samples for sequencing and analysis at the JGI to help produce novel …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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