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The Sphagnome Project: enabling ecological and evolutionary insights through a genus‐level sequencing project
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Metagenomic Sequencing of Two Salton Sea Microbiomes
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Ken Chu
Ken leads the development and maintenance of analytical tools and user interface components for the …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and … Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … into the Metagenome Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, … — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … in many ways, including its large genome with numerous chromosomes. For a long time, this immense size and …
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Complete Genome Sequences of Six Strains of the Genus Methylobacterium
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Frederik Schulz
Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic … Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … Career Research Program, Dr. Roux established and currently leads the Viral Genomics group at the JGI to further explore …
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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This program has supported over …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently … codes of plants is often challenging because in many plants chromosomes are present in more than two copies, a condition …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP …
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