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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools … Mass Spectrometry, NanoSIMS, and other techniques. Q&A from the Webinar: 1. Q(uestion): How much DNA is required … to finish, i.e., QC to separation to library sequencing and assembly. Like others, our turnaround time has been impacted …
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Improving the Cacao Genome and Phytozome
… will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled … by HudsonAlpha scientists, with the help of funding from Mars Wrigley. The annotated genome has been updated to …
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Tissue Cultivation, Preparation, and Extraction of High Molecular Weight DNA for Single-Molecule Genome Sequencing of Plant-Associated Fungi
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A More Intuitive Phytozome Interface
… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … BioMart data warehouse interfaces they have come to rely on from Phytozome, with a more intuitive interface, deployed on … first released in.  Are any genomes from v12 NOT available (via URL forwarding) in v13? A total of 7 genomes present in …
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Revealing enzyme functional architecture via high-throughput microfluidic enzyme kinetics
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Biosynthesis of Haloterpenoids in Red Algae via Microbial-like Type I Terpene Synthases
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are likely to … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies
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Dan Rokhsar
… and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued … and Development after his research interests shifted from condensed matter physics to computational biology, …
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Methanogens implicated by DNA evidence
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Genome Sequence of Verrucomicrobium sp. Strain GAS474, a Novel Bacterium Isolated from Soil
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Sequencing of Genomes from Environmental Single Cells
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