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Conservation of Endophyte Bacterial Community Structure Across Two Panicum Grass Species
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the microbiome systems … Camargo developed a new pipeline for identifying viruses across many thousands of genomes and metagenomes, called …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … effort to create a common set of ‘baseline metadata’ across the files that are submitted by each scientific … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Uncovering the Core Microbiome and Distribution of Palmerolide in Synoicum adareanum Across the Anvers Island Archipelago, Antarctica
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Nikos Kyrpides
… Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative … Research with an emphasis on Microbiome Data Science. His group is developing novel methods for enabling large-scale … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in …
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Mutations in the predicted DNA polymerase subunit POLD3 result in more rapid flowering of Brachypodium distachyon
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Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling
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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or … and fungi can form such symbiotic partnerships. To learn more about these other plant-fungal relationships, an … led by graduate student Fantin Mesny in Stéphane Hacquard’s group at the Max Planck Institute for Plant Breeding …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the JGI … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … year are: Igor Grigoriev (Cross-field) Natalia Ivanova (Biology and Biochemistry) Nikos Kyrpides (Biology and …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics … Berkeley National Laboratory (Berkeley Lab) as well from across the globe via their laptops or even smartphones. This … McClintock brought this background, which focuses on cell biology and how the structure and function of chromosomes …
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