Results

Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… Though visible to the naked eye, microscopy reveals unexpected complexity At first … without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. To put it into context, it would … National Laboratory (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … on cone snails, C. californicus in particular, as a model system for venom-microbe interactions. Cone snail venom has a …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … Berkeley National Laboratory (Berkeley Lab), and the DOE Systems Biology Knowledgebase (KBase). They also built an …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … landscape of vertebrate genomes, which led to the discovery of thousands of genetic switches implicated in … Axel Visel is the JGI's Deputy for Science Programs. Click …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial … help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … deep ocean is the largest inorganic reservoir of carbon on earth; because SAR324 — one of the most abundant organisms …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … Verstraetearchaeota, and the finding lends credence to the idea that the hydrogenotrophic pathway predates the …
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and soybeans are used to produce … , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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