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Whisperings from not so silent mutations
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High-resolution phylogenetic microbial community profiling
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… to understand how the molecules in tiny microbes can impact whole ecosystems. Part of the reason he’s asking this … a steady state where we can keep improving it, but this rapid shift in population and the environmental implications … See you next time. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for … years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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How to Target a Microbial Needle within a Community Haystack
… and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … for members of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast … , combines multiple techniques and was demonstrated using a specific group of marine bacteria called “Vis6” that …
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SpaRC: scalable sequence clustering using Apache Spark
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Protein structure determination using metagenome sequence data
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Benjamin Cole
… interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants … on understanding how microbes can colonize plant roots, focusing on genetic components required for effective … of Cell Identity as an R package … Education … Selected Publications … Software …
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Targeted diversity generation by intraterrestrial archaea and archaeal viruses
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A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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