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Dynamic substrate preferences predict metabolic properties of a simple microbial consortium
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An expanded evaluation of protein function prediction methods shows an improvement in accuracy
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Genomic prediction of switchgrass winter survivorship across diverse lowland populations
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Dan Rokhsar
… the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team … Publications … Selected Publications …
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A Genome-Wide Survey of Switchgrass Genome Structure and Organization
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Identifying candidate structured RNAs in CRISPR operons.
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Structure, function and diversity of the healthy human microbiome
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Structure and Function of the β‑Asp-Arg Polymerase Cyanophycin Synthetase 2
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Major impacts of widespread structural variation on sorghum.
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ZW sex chromosome structure in Amborella trichopoda
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … for plant genomes. They are annotated with the JGI Plant Annotation pipeline, which provides high quality comparisons … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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