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Ecological and genomic analyses of candidate phylum WPS‐2 bacteria in an unvegetated soil
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Combining GWAS and population genomic analyses to characterize coevolution in a legume‐rhizobia symbiosis
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Game On: High School Students Drive Everglades Metagenomics Study
… out to many researchers with the hope of getting support for a research project for his class of 18 juniors.  He got … the workflow and all the process steps of sequencing and analyzing the DNA samples. The class was also able to … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … Archaea, bacteria, and viruses all operate in concert to form the foundation of this deep Earth ecosystem. For …
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Comparative Analyses of Four Reference Genomes Reveal Exceptional Diversity and Weak Linked Selection in the Yellow Monkeyflower (Mimulus guttatus) Complex
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi
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Better Genome Editing for Bioenergy
… tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … , the scientists thus set out to identify which sgRNA sequences were reliable. In an elegant, quantitative screen, …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … applied novel computational and experimental sequence-based methods for elucidating the gene regulatory landscape of … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about our seven …
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Cataloging the Microbes that Manage the Health of River Systems
… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … States. They also provided multiple access points to the information. The team harnessed a community-science program to … available, river-focused microbial resource that provides information at multiple scales from genes to the community …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic activity …
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