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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … Opportunity Program (ETOP) , researchers have developed and improved upon a tool that combines existing DNA sequence … a team of researchers has been working on improving methods for isolating and characterizing entire microbial genomes …
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A More Intuitive Phytozome Interface
… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … the genome you’re after as the dataset. From the (new and improved JGI Data Portal).  Go to  … for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ organism …
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Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations
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John Vogel
… he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the … of transgenic switchgrass lines in an effort to create improved varieties for biomass production. He did his … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress …
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The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
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Annotation and sequence diversity of transposable elements in common bean (Phaseolus vulgaris)
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Functional Annotation of Fibrobacter succinogenes S85 Carbohydrate Active Enzymes
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Identification of a haloalkaliphilic and thermostable cellulase with improved ionic liquid tolerance
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A new-to-nature carboxylation module to improve natural and synthetic CO2 fixation
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Combinatorial library design for improving isobutanol production in Saccharomyces cerevisiae
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A sorghum pangenome reference improves global crop trait discovery
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