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… In honor of the JGI's 25th anniversary in 2022, we have revisited a … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …

… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone … have worked to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, with some artistic endeavors along the way. Eventually, the …

… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification Sequencing … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a … highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …

… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid event, with guests joining onsite at the Integrative Genomics … . Susan Wessler , UC Riverside Shaping up conservative genomes Keynote Talk Title: Transposable Element-Mediated …

… some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … Systems Scientific Focus Area funded by the US Department of Energy (DE-AC02-05CH11231 to J.F.B.). The work ( proposal …

… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …

… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … understand ecosystem-wide processes. Summary geNomad is an annotation and classification framework that combines and … Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of …

… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … for User Science calls. These documents have been shared with permission from the PIs who drafted them.  … to soil carbon storage during simulated range shifts of plant-fungal symbionts …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. … play a critical role in the global carbon cycle, and are of significant interest for their potential contributions to …

… Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … These resources would provide the research community with the ability to address questions such as sphagnum’s …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …