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Massie S. Ballon
S. Ballon is the Communications and Outreach Manager at the JGI. Prior to this role, she served as the primary storyteller and social media manager for the JGI. She produced both text-based and multimedia stories that were then shared along with other JGI-relevant content on social media. She is also involved …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic … how the interplay between gene flow, population statistics, and adaptation mediated the response of …
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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Cataloging the Microbes that Manage the Health of River Systems
… be the first publicly available, river-focused microbial resource that provides information at multiple scales from … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … can successfully partner with DOE user facilities and resources on such large-scale multi-omic data efforts, but also …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … and stimulate a bioeconomy, where renewable, biological resources drive processes, products, and services.  Advancing … expertise while responsibly managing people and resources. “The plan looks toward exciting new directions in …
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Axel Visel
… and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max … Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, major … Ingelheim Fellow. Reviewer for major funding agencies and journals including National Institutes of Health, American …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and …
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Zhong Wang
… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … analyses and software to enable “grand-scale” scientific projects. These solutions include large-scale genome … , assembly quality evaluation software based on Bayesian statistics BioPig , a Hadoop-based data analytic framework …
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Partnerships: Myco-Ed
Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that … compile original data for improving fungal genomic resources empower students through isolation and genome … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … The …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … complex biological and environmental systems. We optimize our service to the community through responsibly managing … users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  … New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar … anywhere around the world can apply to access the JGI’s resources. Q:  Where can I get information for funding by JGI? …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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