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… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building … group also develops and maintains the Phytozome Plant Genomics web portal. … BS in Physics, New York University, … 2023. JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the …

… mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese relative … at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and assembling … 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks …

JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … comparative transcriptomics. *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In … Centralized databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with …

The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have …

Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) Carefully read … multiple ways to can mix and match synthesis, metabolomics, sequencing. The only requirements are that you stay under … science and well-thought-out questions. We are looking for projects that can’t easily be done at a core facility, but …

… is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … feedstocks of interest to the U.S. Department of Energy (DOE). (Poplar is a Flagship Plant.) To engineer them, … through the  Community Science Program , using long-read sequencing to assemble the repetitive areas of the complete …

… tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … goal of producing sustainable fuels from alternative sources. Moreover, the team says the approach they used to … felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a …

… virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … in professional development enrichment activities. For some students in the 2021 cohort, this was their first … the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in …

… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research … relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics …

… samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative … Evolution & Genomics, F1000Prime Reviewer for major journals and funding agencies and philanthropic organizations …