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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling … sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, … next generation of scientists that will help shape all of our futures.” Proposing a Research Experience Benskin wanted …
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Rex Malmstrom
… also carries out custom preparative work for difficult user projects, including those that require fluorescence … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of … sweeps in natural bacterial populations. ISME Journal 10 (7), 1589 Kashtan, N et al. 2014. Single-cell …
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Four principles to establish a universal virus taxonomy
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A Mentor’s Perspective on Training the Next Generation
… the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how …
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Dispatches From JGI Interns
… and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… in oceans or soils.  A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  … than they would gain by pursuing nutrients and other resources in the open oceans.  Other surprises in the research …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it can produce an … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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JGI@25: The Little Alga That Could
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … in 2007 the full genome was sequenced and published in the journal Science . At the time, the project was co-led by … new Chlamydomonas genome-related Community Science Program projects of all kinds,” noted Igor Grigoriev, head of the …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… junk DNA, so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many more … the sequencing efforts expanded beyond LANL to include resources from Lawrence Livermore and Lawrence Berkeley … and a hardworking team. He highlighted several important projects the JGI has worked on, from the myriad of omics …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the … albeit rather weakly. Further investigation on the source of controversy revealed that the branches among … diversification of the early terrestrial fungal lineages. Our analyses estimate these diversification events occurred …
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Uncovering Novel Genomes from Earth’s Microbiomes
Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge … a genome or MAG and press a button to build a model from our database of mappings between biochemical reactions and … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
DSMZ overall, resulting not only in a valuable sequence resource to complement DSMZ’s vast strain resource, but also yielding and supporting many high-impact … of genomic DNA at DSMZ for GEBA-Actino and similar projects.       … The U.S. Department of Energy Joint Genome …
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