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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) and the … on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I thought they were …
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Daniel Udwary
… group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … joining the JGI, he spent time as a faculty member at the University of Rhode Island, as a Senior Scientist at Warp … of secondary metabolism. … PhD in Chemistry, Johns Hopkins University (2003) MS in Chemistry, Johns Hopkins University …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired … interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their … Brenda Yu Class Year: 1st year graduate student at Stanford University in the Biophysics program. (Graduated from UC …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March … Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is located in one of those … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), through the JGI … — then a postdoctoral associate in Ed DeLong’s group at the University of Hawaii at Manoa — and colleagues were able to …
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David Goodstein
Dr. Goodstein held positions at Cornell, IBM, Utah State University, and semiconductor equipment manufacturer … focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to …     Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine (www.intermine.org) … …
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Jinghua Jenny Huang
Jenny is working on the display and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in various formats. …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), with assistance … sugar and biomass. Additionally, the team was able to identify a major locus (Bru1) that durable resistance to brown …
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
Sciences and Engineering Division at King Abdullah University of Science and Technology (KAUST) in Saudi Arabia. …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … and Sabeeha Merchant of UCLA. Merchant is now at UC Berkeley and also a faculty scientist in the Berkeley Lab … on the Chlamy pan-genome and Marina Cvetkovska of the University of Ottawa on the multi-omics of arctic-growing …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), as well as … Berkeley National Laboratory’s Sustainable Systems Scientific Focus Area funded by the US Department of Energy …
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Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea
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