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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … the students participated in networking workshops, data carpentry hackathons, and also made new friends while working … : ”I really enjoyed meeting and getting to know many of the scientists that work here.” Mentor: Lorenzo Aureli Project: …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … team. The work was a joint effort led by scientists at the Center for Advanced Bioenergy and … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … have used JGI capabilities to further their research, watch the JGI Engagement Webinars series. Letters of Intent …
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … this identification, metabolomics enables functional genome annotation, improves understanding of the role small … leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … The JGI uniquely offers the first quantitative Stable Isotope … The JGI provides users access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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Making a Lichen Together
… or together, on nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and … partners. This genomic and transcriptomic analysis has opened the door for more incisive investigations into how …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … context so we don’t overestimate the evolution that happened after polyploidization,” said John Vogel, head of …
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User Support Analysis Group
… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work …
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Alabama Agricultural & Mechanical University Internship Program
… Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in Berkeley, California honing their … success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific …
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Better Genome Editing for Bioenergy
… a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy applications. … said, “Give me six hours to chop down a tree and I will spend the first four sharpening the axe.” In this study,  … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the way to seed but prevent the seeds from falling,” said JGI Plant Program head Jeremy Schmutz , who is also a … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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