Results

JGI@25
Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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Characterization of the Clostridium thermocellum AdhE, NfnAB, ferredoxin and Pfor proteins for their ability to support high titer ethanol production in Thermoanaerobacterium saccharolyticum
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JGI@25: Studying Sorghum’s Survival Skills
… as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 … have cited that genome. Since publishing that original reference genome, the JGI has also continued to collaborate … this time aligning it with over 50 other diverse sorghum genomes. Deep sequencing and genetic linkage analysis …
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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JGI Accepts 17 Proposals for Community Science Program
Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems are adapting to … River Delta. They’re looking at how the microbes in these high latitude wetlands, such as the Copper River Delta … a previous international collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing …
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Single mutation at a highly conserved region of chloramphenicol acetyltransferase enables isobutyl acetate production directly from cellulose by Clostridium thermocellum at elevated temperatures
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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… began to offer a window into viral existence. Along with highlighting the viruses in a given sample, metagenomics … ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified … tool, CheckV, assesses viral genomes, and grades their quality based on completeness. Along with expanding the …
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High Throughput Phosphoglycolate Phosphatase Activity Assay Using Crude Leaf Extract and Recombinant Enzyme to Determine Kinetic Parameters Km and Vmax Using a Microplate Reader
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Data Ecosystem
… of new informatics tools specifically optimized for high-performance computing environments. … KBase is a … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and …
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