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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. … called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … Science Initiative and used resources at the DOE Joint Genome Institute and the Environmental Molecular Sciences …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI … the possibility to reach out to anyone in the Institute to get feedback and insights on the project and everyone’s … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …
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Relationship between Abundance and Specific Activity of Bacterioplankton in Open Ocean Surface Waters
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Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells
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Cloud-Enabled Microscopy and Droplet Microfluidic Platform for Specific Detection of Escherichia coli in Water
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Unraveling the ecological success of Iodidimonas in a bioreactor treating oil and gas produced water.
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Bacterial and fungal composition and exometabolites control the development and persistence of soil water repellency
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … beyond the current understanding that CRISPR-Cas systems target infectious agents like viruses and plasmids. First,  Ca …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… growth chambers let researchers around the world compare their work consistently. And EcoFABs also work well in the classroom. This episode, we visit Los Medanos Community College to see …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … climate shifts. (C4 plants use a more efficient form of photosynthesis that reduces water loss, compared to the …
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