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Tanja Woyke
After studying the mechanism of action of antifungal natural products … 2011. Metagenomic discovery of biomass-degrading genes from cow rumen. Science 331, 463-467. Swan et al. 2011. Potential …
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Leucoagaricus gongylophorus Produces Diverse Enzymes for the Degradation of Recalcitrant Plant Polymers in Leaf-Cutter Ant Fungus Gardens
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Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails
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Mass spectrometry imaging–based assays for aminotransferase activity reveal a broad substrate spectrum for a previously uncharacterized enzyme
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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Triggering Morel Fruiting
Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … borrow some nitrogen from the soil to manufacture catabolic enzymes for the decay apparatus. Consequently, it created a …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day … They hypothesized that certain gene families — including fungal genes horizontally transferred — contributed to the … repeats (NLRs) —stood out for their roles. Peroxidases are enzymes known to help a plant to adapt to environmental …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that there is no shortage of fungal genomes anymore, but their functional interpretation …
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JGI User Executive Committee Expands
Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … feedback on pangenome tool development. Maurice is a fungal evolutionary ecologist with interests in … Investigator proposal to understand the genetic basis of fungal community assembly on dead wood decomposition. She’s …
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Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
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Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. Studying …
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