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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing … are estimated to produce 500 million tons of methane a year, which is over half the total global methane … of tons of the carbon dioxide trapped in biomass each year to do so. As such, they are considered to have a …
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Forming Scientific Connections and Building Community
… interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … – were selected to continue their research over the school year.   …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for … by 2023, that number was almost 717 trillion. Last year, the JGI surpassed three Petabases of data sequenced — …   ( Subscribe to Genome Insider on  Apple Podcasts ,  Spotify or wherever you get your podcasts) Microbial ecologist …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… papers, including two Nature Plants publications, in five years, have come out of the JGI-supported project. “The JGI … Institute of Aquatic Science and Technology in September 2021. Robinson stressed that the DNA Synthesis Science … of the DNA Synthesis Science Program by applying to the year-round Community Science Program Functional Genomics …
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Mindfully Moving JGI
… sequencing labs in Building 100 were silent. Twenty years after the JGI united the genomics expertise of three … miles away in another city and county began more than three years ago. For JGIers, the moving process began in 2017 with … allowed JGI staff to mindfully declutter. Earlier this year, the third and final annual cleanup day filled nearly …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome … Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for the Joint Genome … an effort and Ray is that person.” For nearly all of his 15 years of his JGI/Berkeley Lab tenure, Ray kept the …
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A More Intuitive Phytozome Interface
… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … genomes and has been under active development for over 5 years, provides users with the genome browsers, gene pages, … restoration. They include Jalview (for viewing and modifying multiple sequence alignments). Variation view on …
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A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing
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Silicon-rich soil amendments impact microbial community composition and the composition of arsM bearing microbes
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Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024)
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Game On: High School Students Drive Everglades Metagenomics Study
… of 2018, Jonathan Benskin was preparing to teach a second year A-Level Advanced International Certificate of Education … answers being, “It would take a team of Ph.D.’s over a year to do a project at this capacity.” Jonathan’s thought … is over and the students are preparing for their senior year, they will have to come back together as the paper goes …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… honor of the occasion. To a packed conference room of this year’s program cohort, mentors, alumni, and other JGI staff, … including 2018 intern Candace Cole, noted that “each year, they bring an invaluable benefit to our group’s … part of UC Merced’s history and already in its five years has made a really strong impact,” she said. “I look …
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