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A versatile toolkit for high throughput functional genomics with Trichoderma reesei
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic … to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … Lawrence Berkeley National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user facility …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … United States. They also provided multiple access points to the information. The team harnessed a community-science … watershed scale models to manage river ecosystems. One application for the information is the development of river …
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Network Modeling of Complex Data Sets
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Cell-free styrene biosynthesis at high titers
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Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream
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Doubling Down on Known Protein Families
… is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … categories of proteins, including those with pivotal applications in biotechnology, such as DNA editing enzymes.” …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In … contingent fruiting in the wild, this technique provides a highly reproducible system which allows the black morel to …
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Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal
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acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data
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Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements
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