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Ray Turner Completes Last Tour of Lab Duty at JGI
… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … as a national user facility. He did this with aplomb, managing his dedicated “Ops Team” who dealt with leaky … before the event segued to remarks by the leadership of the DOE Office of Biological and Environmental Research: …
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The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole
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Evolutionary constraint facilitates interpretation of genetic variation in resequenced human genomes
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … to improving crop yields and a better understanding of the roles viruses and their host microbes play in nutrient …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … research has been focused on semantic and object-oriented data modeling, and biological data management. She was one … developed at Berkeley Lab. Dr. Chen is currently the Microbiome Computational Resource Lead at the JGI, …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have … For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining … LB et al. A thermostable Cas9 with increased lifetime in human plasma. Nat Commun. 2017 Nov 10;8(1):1424. doi: …
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Network Modeling of Complex Data Sets
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The parallelism motifs of genomic data analysis
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Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation
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Carboxysomal carbonic anhydrases: Structure and role in microbial CO2 fixation
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Genome-wide role of codon usage on transcription and identification of potential regulators
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Exploring the roles of microbes in facilitating plant adaptation to climate change
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