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Pinning Down a Piece of Photosynthesis
… pin down.  Photosynthesis appears to have a lot in common with a Rube Goldberg machine: surprising dependencies, … on this structure, Grosjean and Blaby-Haas collaborated with a range of researchers across the Albert Einstein … the instrumentation — but the experts we were able to work with on this project to ask questions about structure and …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… hand against any kind of biomass breakdown. They’ve spent millions of years evolving tactics against potential … of California Santa Barbara. So plants don’t break down without a fight, but it’s an important battle to fine-tune. … the energy they store.      Since 2012, O’Malley has worked with the JGI to understand the enzymes these organisms use …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
Find recordings and recaps of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , … two kinds of scientific revolutions,” Ari Patrinos opened with this quote from Thomas Kuhn in his 25th Anniversary … are numbers out there, Drell noted, including the figure 30-million fold: How much JGI’s productivity has increased …
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iPHoP: A Matchmaker for Phages and their Hosts
… these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of … evaluates multiple predictions to reliably match viruses with their archaea and bacteria hosts. The Impact Within the domains of archaea and bacteria, millions of  microbes govern ecosystems. These organisms …
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JGI@25: From Life at the Extremes to Editing Genomes
National Laboratory – jointly the Nobel Prize in Chemistry with Emmanuelle Charpentier of the Max Planck Institute! … This is the first science Nobel awarded to two women, with Charpentier and Doudna bringing the total number of … system. For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason … engineering of biofuels. Since 2010, the JGI has partnered with researchers around the world to map out genomes of … were able to provide colleagues at the Salk Institute with genomic DNA samples from Ruminococcus flavefaciens …
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Alabama A&M Interns Access An Abundance of Knowledge
Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the … also took part in many enriching workshops and networked with fellow interns and scientists alike. Want to learn more … roots of a plant in the soil. And I’m specifically working with a grass plant that’s similar to wheat and rice called …
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Tracing the Evolution of Shiitake Mushrooms
… sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks the enzymes … Lentinula genus diverged roughly 28 million years ago, when the largest mammal … more genetic diversity in wild Lentinula species compared with farmed cultivars, highlighting a potential conservation …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… in 1990 when the U.S. Department of Energy (DOE) partnered with the National Institutes of Health. The DOE works with the National Nuclear Security Administration to … involved in repair of DNA damage, and those associated with atherosclerosis and diabetes mellitus. Los Alamos …
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10 From JGI on the 2019 Highly Cited Researchers List
… of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, … over the last year: Kerrie Barry and Jeremy Schmutz worked with a community of switchgrass researchers to conduct a …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida … Laboratory (Berkeley Lab), embarked on a pilot project with biology students from Boca Raton Community High School … the  Metagenome Program . “After discussing the project with him, I was inspired by his enthusiasm and drive to give …
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Taking Stock of the Known and Unknown Microbial Space
… what is still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out … expanded the estimated diversity of Bacteria and Archaea With phylogenetic diversity standing in as a representative …
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