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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Informatics Advisory Committee
… effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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JGI Hosts GPU Hackathon in May
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI … Officer Kjiersten Fagnan of the upcoming event. “The tools we use to process and analyze these data are diverse …
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Microbiome Data Science: Understanding Our Microbial Planet
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BioPig: a Hadoop-based analytic toolkit for large-scale sequence data
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A data analysis and coordination center for the human microbiome project
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Integrative analysis of multimodal mass spectrometry data in MZmine 3
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BAYESIAN SPATIAL-TEMPORAL MODELING OF ECOLOGICAL ZERO-INFLATED COUNT DATA.
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DOE Metrics
… hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational approaches for the annotation of genomic data. [Download PDF] Q4 – Report on a new computational …
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Natural Prodcast Episode 7: Ben Shen
… first one, first that we call antibody drug conjugates, abbreviated as “ADC”, was approved in the year 2000, and … be useless unless you make the invention available to broad user groups. So, I view the project that we are working on … so everybody, readers of the library, can come to our databases and look for the specific information they are …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated …
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Axel Visel
Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in …
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