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Transcriptional control of Clostridium autoethanogenum using CRISPRi
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change … impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … are affected by warming events. More time-series studies could help researchers improve predictive models on …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … different soil communities for taxonomic diversity. These studies could pinpoint populations, but they said little … said, the 1000 Fungal Genomes project, together with other CSP projects, had sequenced over 2,000 fungal genomes. The …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s CSP investigators,” said Tanja Woyke, Deputy Director of …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA and JW …
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Webinars on Offerings & Capabilities
Below are a list of webinars that can help you through the submission process by better … Research shows researchers how to tap into the capabilities of the Advanced Photon Source when applying to the FICUS …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted … available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, …
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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … found only in the archaeal lineage Euryarchaeota; recent studies now suggest the gene cluster predates this microbial … methanogenesis occurring in the entire archaeal domain of life.” … The U.S. Department of Energy Joint Genome …
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