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Richard Fox
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … studying Chromosome 5, which contains about 6% of the human genome . They discovered genes linked to conditions such as … was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet …
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi …
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Metabolomics
… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse … products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of experimental …
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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools … from the Webinar: 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We want to put at least a microgram of DNA in the …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through … Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User … of the University of California, Berkeley is interested in better characterizing the role endosymbiotic bacteria play …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … the team grew two sorghum varieties: one that tolerates better pre-flowering drought stress and a “stay-green” …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence …
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How Filamentous Fungi Sense Food
… Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the direct binding sites of many transcription factors to better understand how nutrients are acquired and carbon is …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … available for other JGI users outside the realm of bioenergy optimization. Summary Life is all about balance. … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… less salt — near the surface where algae grow. Armed with a better understanding of the alga’s stress resistance and … manage the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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