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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale … joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Three Join the JGI User Executive Committee
Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest … and thrust lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the … on review panels for the JGI Community Science Program (CSP) proposals. He  brings experience representative of the …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … at the time. Following the publication of their paper in 2011, Dr. Sekimoto from University of British Columbia and …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what … through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA and JW …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into … Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be converted to energy, are … for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, then tested for …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … a laboratory — and rumen microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs … elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or as … 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science Foundation …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, … Emma Timmins-Schiffman, Andressa M. Venturini, Valentin Waschulin, Flavia Winck Vischi, Jennifer Wisecaver, Yaqi You, … researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic … answer is no. They refer to the infected microbial cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. …
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