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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office of Science of …
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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
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A More Intuitive Phytozome Interface
… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for over 5 … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …
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JGI on the 2020 Highly Cited Researchers List
… a consortium that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature … that led to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI Announces 2025 New Investigator Portfolio
… and environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, …
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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Improving Microbial Genome Annotations in an Integrated Database Context
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The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes
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Abiotic selection of microbial genome size in the global ocean
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