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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
… at King Abdullah University of Science and Technology (KAUST) in Saudi Arabia. …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… in mammals: a structure that helps correct deleterious mutations. The Impact Shrub willow and its close … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Key Research and Development Program of China (2017YFC0505203, 2016YFD0600101), and the National Key …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Tracking the Origins of Methane-Producing Microbes
… the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from a hot spring …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… tap into the diverse talent that UC Merced has is tremendous for us, and we are very grateful for this opportunity.” … to seeing this internship program continue and I’m excited about what it will bring to the future of JGI, UC Merced and … updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant Professor of Mathematics at …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic … Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , administrative …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … Research Division.. As a postdoc, her research focused on stable and accurate computational methods for … 2018 NERSC, CRD Petascale Postdoctoral Fellow … Education … About the JGI Chief Informatics Officer … Selected …
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Scaling Up Existing Skill Sets
… experience working intermediately between academia and industry, which is something I didn’t even know existed before. … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has … JGI intern for a second time since participating in summer 2017 ( read more here on her previous experience) has …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … Prize studentship Editorial board member for Scientific Reports … Education … Selected Publications … Awards and …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … the development of novel computational tools to identify virus sequences, the design of new experimental approaches to … 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … root-associated microbiome in maize (Zea mays). Scientific Reports. 2021. doi:10.1038/s41598-020-79320-z 3. Louie KB, …
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