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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base … ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of … technologies for producing both reference genomes and epigenomics, researchers are unwrapping complex mechanisms of …
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Back in the Lab: the 2023 Summer Intern Experience
This summer marked the first fully in-person internship experience in several years for students and researchers alike at the JGI. With the past …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Gary Trubl, a virologist at Lawrence Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he first needs their DNA.   …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to … and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 … the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to … through the more than 2 million viral sequences available in IMG/VR v3. …
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The Soil Blooms Green
Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the soil. Penn State researchers Mary Ann Bruns and …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from …
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JGIota: Looking Back at Sequencing for Soybeans
The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, …
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Creating an Energy Market for Miscanthus
What grass is a prized ornamental and a bioenergy plant? Meet Miscanthus , an attractive addition to your garden and a potential fuel for the future. But, to be competitive in the market, both energy policy and Miscanthus will need …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … . Research shows that flagella were lost in other forms of  Chloroflexota that adapted to marine environments …
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