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Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & … for the summer term (May through August) and selected projects will receive stipend and travel expenses, both for … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the …
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Uri Neri
Uri Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … out,” said JGI user/collaborator Michelle O’Malley, a chemical and biological engineer at the University of California … into biochemical production.    Over time, as these projects have delivered results, they have also snowballed …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the …
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“A STEM career is in reach and accessible”
High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth in the Bay Area with personal, academic and professional development experiences that …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear …
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
… multiple programs had their own goals to achieve, they constantly collaborated with each other on new ways of presenting and researching science. …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … worked together on the development of a new software tool called geNomad that identifies and classifies mobile genetic …
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